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lines 6-335 of file: example/atomic_three/jac_sparsity.cpp
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{xrst_begin atomic_three_jac_sparsity.cpp}

Atomic Function Jacobian Sparsity: Example and Test
###################################################

Purpose
*******
This example demonstrates calculation of a Jacobian sparsity pattern
using an atomic operation.

Function
********
For this example, the atomic function
:math:`g : \B{R}^3 \rightarrow \B{R}^2` is defined by

.. math::

   g(x) = \left( \begin{array}{c}
      x_2 * x_2 \\
      x_0 * x_1
   \end{array} \right)

Jacobian
********
The corresponding Jacobian is

.. math::

   g^{(1)} (x) = \left( \begin{array}{ccc}
     0  &   0 & 2 x_2 \\
   x_1  & x_0 & 0
   \end{array} \right)

Start Class Definition
**********************
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# include <cppad/cppad.hpp>
namespace {          // begin empty namespace
using CppAD::vector; // abbreviate CppAD::vector as vector
//
class atomic_jac_sparsity : public CppAD::atomic_three<double> {
/* {xrst_code}
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Constructor
***********
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public:
   atomic_jac_sparsity(const std::string& name) :
   CppAD::atomic_three<double>(name)
   { }
private:
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for_type
********
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   // calculate type_y
   bool for_type(
      const vector<double>&               parameter_x ,
      const vector<CppAD::ad_type_enum>&  type_x      ,
      vector<CppAD::ad_type_enum>&        type_y      ) override
   {  assert( parameter_x.size() == type_x.size() );
      bool ok = type_x.size() == 3; // n
      ok     &= type_y.size() == 2; // m
      if( ! ok )
         return false;

      type_y[0]  = type_x[2];
      type_y[1] = std::max(type_x[0], type_x[1]);
      return true;
   }
/* {xrst_code}
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forward
*******
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{xrst_code cpp} */
   // forward mode routine called by CppAD
   bool forward(
      const vector<double>&              parameter_x  ,
      const vector<CppAD::ad_type_enum>& type_x       ,
      size_t                             need_y       ,
      size_t                             order_low    ,
      size_t                             order_up     ,
      const vector<double>&              taylor_x     ,
      vector<double>&                    taylor_y     ) override
   {
# ifndef NDEBUG
      size_t n = taylor_x.size() / (order_up + 1);
      size_t m = taylor_y.size() / (order_up + 1);
# endif
      assert( n == 3 );
      assert( m == 2 );
      assert( order_low <= order_up );

      // return flag
      bool ok = order_up == 0;
      if( ! ok )
         return ok;

      // Order zero forward mode must always be implemented
      taylor_y[0] = taylor_x[2] * taylor_x[2];
      taylor_y[1] = taylor_x[0] * taylor_x[1];

      return ok;
   }
/* {xrst_code}
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jac_sparsity
************
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{xrst_code cpp} */
   // Jacobian sparsity routine called by CppAD
   bool jac_sparsity(
      const vector<double>&               parameter_x ,
      const vector<CppAD::ad_type_enum>&  type_x      ,
      bool                                dependency  ,
      const vector<bool>&                 select_x    ,
      const vector<bool>&                 select_y    ,
      CppAD::sparse_rc< vector<size_t> >& pattern_out ) override
   {
      size_t n = select_x.size();
      size_t m = select_y.size();
      assert( parameter_x.size() == n );
      assert( n == 3 );
      assert( m == 2 );

      // count number of non-zeros in sparsity pattern
      size_t nnz = 0;
      // row 0
      if( select_y[0] && select_x[2] )
         ++nnz;
      // row 1
      if( select_y[1] )
      {  // column 0
         if( select_x[0] )
            ++nnz;
         // column 1
         if( select_x[1] )
            ++nnz;
      }

      // size of pattern_out
      size_t nr = m;
      size_t nc = n;
      pattern_out.resize(nr, nc, nnz);

      // set the values in pattern_out using index k
      size_t k = 0;

      // y_0 depends and has possibly non-zeron partial w.r.t x_2
      if( select_y[0] && select_x[2] )
         pattern_out.set(k++, 0, 2);
      if( select_y[1] )
      {  // y_1 depends and has possibly non-zero partial w.r.t x_0
         if( select_x[0] )
            pattern_out.set(k++, 1, 0);
         // y_1 depends and has possibly non-zero partial w.r.t x_1
         if( select_x[1] )
            pattern_out.set(k++, 1, 1);
      }
      assert( k == nnz );
      //
      return true;
   }
}; // End of atomic_three_jac_sparsity class

/* {xrst_code}
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Use Atomic Function
*******************
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bool use_jac_sparsity(bool x_1_variable, bool forward)
{  bool ok = true;
   using CppAD::AD;
   using CppAD::NearEqual;
   double eps = 10. * CppAD::numeric_limits<double>::epsilon();
   //
   // Create the atomic_jac_sparsity object correspnding to g(x)
   atomic_jac_sparsity afun("atomic_jac_sparsity");
   //
   // Create the function f(u) = g(u) for this example.
   //
   // domain space vector
   size_t n  = 3;
   double u_0 = 1.00;
   double u_1 = 2.00;
   double u_2 = 3.00;
   vector< AD<double> > au(n);
   au[0] = u_0;
   au[1] = u_1;
   au[2] = u_2;

   // declare independent variables and start tape recording
   CppAD::Independent(au);

   // range space vector
   size_t m = 2;
   vector< AD<double> > ay(m);

   // call atomic function
   vector< AD<double> > ax(n);
   ax[0] = au[0];
   ax[2] = au[2];
   if( x_1_variable )
   {  ok   &= Variable( au[1] );
      ax[1] = au[1];
   }
   else
   {  AD<double> ap = u_1;
      ok   &= Parameter(ap);
      ok   &= ap == au[1];
      ax[1] = u_1;
   }
   // x_1_variable true:  y = [ u_2 * u_2 ,  u_0 * u_1 ]^T
   // x_1_variable false: y = [ u_2 * u_2 ,  u_0 * p   ]^T
   afun(ax, ay);

   // create f: u -> y and stop tape recording
   CppAD::ADFun<double> f;
   f.Dependent (au, ay);  // f(u) = y
   //
   // check function value
   double check = u_2 * u_2;
   ok &= NearEqual( Value(ay[0]) , check,  eps, eps);
   check = u_0 * u_1;
   ok &= NearEqual( Value(ay[1]) , check,  eps, eps);

   // check zero order forward mode
   size_t q;
   vector<double> xq(n), yq(m);
   q     = 0;
   xq[0] = u_0;
   xq[1] = u_1;
   xq[2] = u_2;
   yq    = f.Forward(q, xq);
   check = u_2 * u_2;
   ok &= NearEqual(yq[0] , check,  eps, eps);
   check = u_0 * u_1;
   ok &= NearEqual(yq[1] , check,  eps, eps);

   // sparsity pattern for identity matrix
   size_t nnz;
   if( forward )
      nnz = n;
   else
      nnz = m;
   CppAD::sparse_rc< CPPAD_TESTVECTOR(size_t) > pattern_in(nnz, nnz, nnz);
   for(size_t k = 0; k < nnz; ++k)
      pattern_in.set(k, k, k);

   // Jacobian sparsity for f(u)
   bool transpose     = false;
   bool dependency    = false;
   bool internal_bool = false;
   CppAD::sparse_rc< CPPAD_TESTVECTOR(size_t) > pattern_out;
   if( forward )
   {  f.for_jac_sparsity(
         pattern_in, transpose, dependency, internal_bool, pattern_out
      );
   }
   else
   {  f.rev_jac_sparsity(
         pattern_in, transpose, dependency, internal_bool, pattern_out
      );
   }
   const CPPAD_TESTVECTOR(size_t)& row = pattern_out.row();
   const CPPAD_TESTVECTOR(size_t)& col = pattern_out.col();
   CPPAD_TESTVECTOR(size_t) row_major  = pattern_out.row_major();
   //
   // first element in row major order has index (0, 2)
   size_t k = 0;
   size_t r = row[ row_major[k] ];
   size_t c = col[ row_major[k] ];
   ok      &= r == 0 && c == 2;
   //
   // second element in row major order has index (1, 0)
   ++k;
   r   = row[ row_major[k] ];
   c   = col[ row_major[k] ];
   ok &= r == 1 && c == 0;
   //
   if( x_1_variable )
   {  // third element in row major order has index (1, 1)
      ++k;
      r   = row[ row_major[k] ];
      c   = col[ row_major[k] ];
      ok &= r == 1 && c == 1;
   }
   // k + 1 should be the number of values in sparsity pattern
   ok &= k + 1 == pattern_out.nnz();
   //
   return ok;
}
}  // End empty namespace
/* {xrst_code}
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Test with u_1 Both a Variable and a Parameter
*********************************************
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{xrst_code cpp} */
bool jac_sparsity(void)
{  bool ok           = true;
   //
   bool u_1_variable = true;
   bool forward      = true;
   ok               &= use_jac_sparsity(u_1_variable, forward);
   //
   u_1_variable      = true;
   forward           = false;
   ok               &= use_jac_sparsity(u_1_variable, forward);
   //
   u_1_variable      = false;
   forward           = true;
   ok               &= use_jac_sparsity(u_1_variable, forward);
   //
   u_1_variable      = false;
   forward           = false;
   ok               &= use_jac_sparsity(u_1_variable, forward);
   //
   return ok;
}
/* {xrst_code}
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{xrst_end atomic_three_jac_sparsity.cpp}